Function reference • PairViz

All functions

best_orientation(): Re-orients a path to be weight-decreasing

cancer: Cancer Survival data

desaturate_color(): Desaturates colors

eseq() eseqa() kntour_drop() kntour_add(): Construct eulerian paths on the complete graph where nodes are integers 1..n.

etour(): Constructs eulerian tours on a graph.

eulerian(): ~~ Methods for Function eulerian ~~

even_graph-class graph_NEL-class is_even_graph is_even_graph,even_graph-method is_even_graph,graphNEL-method: Class of graphs where all nodes have even degree

find_path(): Constructs a path from a matrix of edge weights.

guided_pcp(): Guided parallel coordinate plot.

zigzag() hpaths() permute_hpaths(): Hamiltonian paths on the complete graph on 1..n, using Lucas-Walecki constructions.

mc_plot(): Multiple comparison plot.

mk_complete_graph(): Constructs a complete graph.

mk_even_graph-methods mk_even_graph,ANY-method mk_even_graph,graphNEL-method mk_even_graph,matrix-method mk_even_graph,numeric-method mk_even_graph,even_graph-method mk_even_graph: Constructs an even graph

order_best(): Uses brute-force enumeration to find the best hamiltonian on the complete graph on 1..n.

order_tsp(): Uses tsp to find the best hamiltonian on the complete graph on 1..n

overlayCI(): Function to overlay confidence intervals on the current plot.

overview PairViz-package: Overview of PairViz package

path_cor(): Measures the tendency of edge weights to increase.

path_weights() path_cis() edge2dist() dist2edge() edge_index(): Utility functions to manipulate pairwise information.

pcp() catpcp(): Enhanced parallel coordinate plots.

knn_graph() dn_graph() mk_binary_graph() mk_hypercube_graph() mk_line_graph() kspace_graph() graph_product() graph_compose() graph_sum() bipartite_graph() iterated_line_graph(): Functions to construct graphs.

factor_spreadout() rater_spreadout(): Functions to prepare for categorical parallel coordinates, drawn by catpcp.

table_plot(): Plots rectangles on a grid

weighted_hpaths(): Constructs weight decreasing hamiltonian paths