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Re-orients a path/cycle, preserving adjacencies so that weights tend to decrease. From specifies the starting point, for cycles only.

Usage

best_orientation(path, d, cycle=FALSE, path_dir= path_cor, from=NULL)

Arguments

path

A vector giving a hamiltonian.

d

A dist, used to provide edge weights.

cycle

If TRUE, the path is interpreted as a closed path.

path_dir

A function used to evaluate a path start and orientation

from

Sepcifies the starting point, for cycles only.

References

see overview

Author

C.B. Hurley and R.W. Oldford

See also

Examples


require(PairViz)

rdist <- function(n) {
  d <- matrix(0,n,n)
  d[lower.tri(d)] <- runif(n*(n-1)/2)
  return(as.dist(d))
  }
r <- rdist(7)
best_orientation(1:7,r) 
#> [1] 1 2 3 4 5 6 7
best_orientation(1:7,r,cycle=TRUE) 
#> [1] 4 3 2 1 7 6 5